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Rv1908c More about Rv1908c on TBDB.org More about Rv1908c on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv1908c: Codons 140 to 159: 12 mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | AGC/GCC? | 418-419? | 140 | Ser/Ala | - | - | - | - | - | - | - | - | - | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | AGC/AAC | 419 | 140 | Ser/Asn | 2006 | USA, Spain | HP asay, molecular beacon assay, Sequencing | - | - | 0.2ug/ml proportion method, 0.1 for BACTEC methods | Proportion method, BACTEC MGIT 960, BACTEC 460 | 403/1111 | 9/0 | - | - |
| Secondary Publication: Hazbon MH AAC 2006 | AGC/GGC | 418 | 140 | Ser/Gly | - | - | - | - | - | - | - | - | - | - | - |
| Hai Hua Lin TubercRespirDis 2007 | AGC/AGA | 420 | 140 | Ser/Arg | 2004 | South Korea | Sequencing | Whole gene | MDR | N.S. | N.S | 29/29 | 1/0 | katG N238K | - |
| Sekigushi J JCM 2007 | TTG/TTC | 423 | 141 | Leu/Phe | 2007 | Japan, Poland | Sequencing | Whole gene | - | - | Proportionmethod, BACTEC MGIT 960 | 38/138 | 2/0 | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | GAC/GCC | 425 | 142 | Asp/Ala | - | - | - | - | - | - | - | - | - | - | - |
| Gagneux S PLOS Path 2006 | AAG/ACG | 428 | 143 | Lys/Thr | - | - | - | - | - | - | - | - | - | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | CTG/GCG | 443 | 148 | Leu/Ala | - | - | - | - | - | - | - | - | - | - | - |
| Rouse et al MM 1996 | CTG/CGG | 443 | 148 | Leu/Arg | 1996 | - | - | - | - | - | N.S. | n/a | - | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | CCG/GCG?? See Note | See Note | 150 | Leu/Ala Error? See Note | - | - | - | - | - | - | - | - | - | - | - |
| Marttila HJ AAC 1998 | TAC/TCC | 464 | 155 | Tyr/Ser | 1993-1995 | Russia | Sequencing. | Whole gene | HRSK | 1 ug/ml I, 5 ug/ml R | Proportionmethod | 24/27 | 1/0 | Arg463Leu katG, Ser 531Leu rpoB | - |
| Gagneux S PLOS Path 2006 | TAC/TGC | 464 | 155 | Tyr/Cys | 1994-2004 | Hong Kong | PCR-SSCP, Sequencing | Whole gene | N.S. | - | Absolute concentration method | 250 | 241 | 3 | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |