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Rv1908c More about Rv1908c on TBDB.org More about Rv1908c on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv1908c: Codons 100 to 119: 12 mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Rouse et al MM 1996 | CGG/CTG | 311 | 104 | Arg/Leu | 1996 | - | - | - | - | >500 | N.S. | n/a | 100 fold reduction in peroxidase activity | - | - |
| Gagneux S PLOS Path 2006 | CGG/CAG | 311 | 104 | Arg/Gln | - | - | - | - | - | - | - | - | - | - | - |
| Gagneux S PLOS Path 2006 | GCG/GTG | 317 | 106 | Ala/Val | - | - | - | - | - | - | - | - | - | - | - |
| Gagneux S PLOS Path 2006 | TGG/CGG or TGG/AGG | 319 | 107 | Trp/Arg | - | - | - | - | - | - | - | - | - | - | - |
| Baker LV AAC 2005 | TGG/TGA | 321 | 107 | Trp/STOP | 1998 | United Kingdom | Directed Oligonucleotide array, Sequencing | Whole gene | H,HS,HE,HSE,MDR | ratio>=4 | Resistance ratio method | 202/378 | 1/0 | ahpC-30T | - |
| Rouse et al MM 1996 | CAC/GAC | 322 | 108 | His/Asp | 1996 | - | - | - | - | - | N.S | n/a | - | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | CAC/GAA or CAC/GAG | 322,324 | 108 | His/Glu | - | - | - | - | - | - | - | - | - | - | - |
| Rouse DA AAC 1995 | CAC/CAG | 324 | 108 | His/Gln | 1995 | USA, South Korea | PCR-SSCP, Sequencing | Whole gene | H | 50 | Absolute concentration method | 26/26 | 1/0 | - | - |
| Gagneux S PLOS Path 2006 | GCT/GTT | 326 | 109 | Ala/Val | - | - | - | - | - | - | - | - | - | - | - |
| Wei CJ AAC 2003 | GCC/GTC | 329 | 110 | Ala/Val | 2003 | - | - | - | H | - | - | - | - | - | - |
| Secondary Publication: Ramaswamy S Musser JM Tubercle lung Dis 1998 | del | ? | 113 | Frameshift? | - | - | - | - | - | - | - | - | - | - | - |
| Lavender C AAC 2005 | GAC/GCC | 350 | 117 | Asp/Ala | 2001-2003 | Australia | Sequencing | Whole gene | HR | 0.4 ug/ml I | BACTEC | 52/104 | 1/0 | - | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |