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Rv1908c More about Rv1908c on TBDB.org More about Rv1908c on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv1908c: Codons 0 to 19: 9 mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Gagneux S PLOS Path 2006 | GTG/TTG or GTG/CTG | 1 | 1 | Val/Leu | - | - | - | - | - | - | - | - | - | - | - |
| Heym B MolMicro 1995 | GTG/GCG | 2 | 1 | Val/Ala | 1995 | Russia | PCR-SSCP, Sequencing | Whole gene | MDR | 1 | Proportion method | 34/37 | 1/0 | - | - |
| Cockerill FR JID 1995 | CCC/TCC | 4 | 2 | Pro/Ser | 1995 | USA, Japan | Sequencing | Whole gene | - | 0.12 | Proportion method | 40071 | 1/0 | Ala65Thr, Ala66Pro, Met126Ile, Ala243Ser, Asn258Ser, Ala264Thr, Tyr337Phe | - |
| Siddiqi N AAC 2002 | del C | 30 | 10 | TRUNC 26aa | 1995-1998 | India | Sequencing | nt 3-239 & 1187-1600 | H,HRO,HR,HROS | 10ug/ml R, 1ug/ml I, 2ug/ml O 2ug/ml S | Proportion method | 74/126 | 6/0 | R463L KatG, S95T gyrA, H526R rpo, H526Y rpo, D516V rpo, S531L rpo, D94A gyrA, K121K rpsL | - |
| Cockerill FR JID 1995 | del 8bp | - | 10 | Frameshift | 1995 | USA | Sequencing | Whole gene | H | >32ug/ml | Proportion method | 40071 | 1/0 | Ala424Val and Ala550Asp in katG. | - |
| Siddiqi N AAC 2002 | ACC/GCC | 31 | 11 | Thr/Ala | 1995-1998 | India | Sequencing | 3-239,1187-1600 | H,R | 10ug/ml R, 1ug/ml I | Proportion method | 74/126 | 1/0 | R463L KatG, D516G rpo | - |
| Siddiqi N AAC 2002 | ACC/CCC | 34 | 12 | Thr/Pro | 1995-1998 | India | Sequencing | nt 3-239 1187-1600 | H | 1ug/ml I | Proportion method | 74/126 | 1/0 | R463L KatG | - |
| Cockerill FR JID 1995 | AGC/AAC | 50 | 17 | Ser/Asn | 1995 | USA | Sequencing | Whole gene | H | 0.12-1ug/ml | Proportion method | 40071 | - | Gly19Asp, Gln224Glu, Ala243Ser, Ala550Asp | - |
| Cockerill FR JID 1995 | GGC/GAC | 56 | 19 | Gly/Asp | 1995 | USA | Sequencing | Whole gene | H | 0.12ug/ml | Proportion method | 40071 | 0/1 | Pro2Ser, Ser17Asn, Gln224Glu, Ala243Ser, Ala550Asp | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |