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Rv0005 More about Rv0005 on TBDB.org More about Rv0005 on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv0005: Codons 460 to 479: 5 mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Duong DA AAC 2009 | GAC/CAC | 1414 | 472 | Asp/His | 2005-2007 | Vietnam | Sequencing | QRDRs on gyrA and gyrB | - | - | Proportion method | 109/218 | 1/0 | No other mutation in gyrA or gyrB | - |
| Aubry A AAC 2006 | GAC/CAC | 1414 | 472 | Asp/His | Published 2006 | France | Sequencing | QRDRs on gyrA and gyrB | Strongly resistant to OFX | OFX: 60ug/ml | N.S. | 14/15 | 1/0 | "Ala90Val in gyrA; no other mutations in QRDR of gyrB." | - |
| Pitaksajjakul P Southeast Asian J Trop Med Public Health 2005 | GAC/AAC | 1414 | 472 | Asp/Asn | Published 2005 | Thailand | PCR-SSCP, Sequencing | "320-bp QRDR of gyrA; 429-bp QRDR of gyrB." | INH+RIF+STR+EMB+OFX | N.S. | Absolute concentration method | 35/35 | 1/0 | No further mutations in gyrA or gyrB QRDRs found. | - |
| Duong DA AAC 2009 | GAC/AAC | 1414 | 472 | Asp/Asn | 2005-2007 | Vietnam | Sequencing | QRDRs on gyrA and gyrB | - | - | Proportion method | 109/218 | 1/0 | gyrA D94A | - |
| Duong DA AAC 2009 | GAC/GCC | 1415 | 472 | Asp/Ala | 2005-2007 | Vietnam | Sequencing | QRDRs on gyrA and gyrB | - | - | Proportion method | 109/218 | 1/0 | gyrA A90V | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |