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Rv3854c More about Rv3854c on TBDB.org More about Rv3854c on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv3854c: all mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| DeBarber AE PNAS 2000 | del 1bp | 65 | - | Frameshift | Published 2000 | South Africa | Sequencing | Whole gene | Eth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | del A | 110 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| DeBarber AE PNAS 2000 | GGC/TGC | 127 | 43 | Gly/Cys | Published 2000 | South Africa | Sequencing | Whole gene | HEth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | GGC/AGC | 127 | 43 | Gly/Ser | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| DeBarber AE PNAS 2000 | CCC/CTC | 152 | 51 | Pro/Leu | Published 2000 | South Africa | Sequencing | Whole gene | EthL | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | GAC/GCC | 167 | 55 | Asp/Ala | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Gly279Asp, mabA -15 C/T | - |
| DeBarber AE PNAS 2000 | GAC/GCC | 173 | 58 | Asp/Ala | Published 2000 | South Africa | Sequencing | Whole gene | Eth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| DeBarber AE PNAS 2000 | TAC/GAC | 250 | 84 | Tyr/Asp | Published 2000 | South Africa | Sequencing | Whole gene | Eth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | ins A | 338 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 100ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| DeBarber AE PNAS 2000 | ACG/AAG | 557 | 186 | Thr/Lys | Published 2000 | South Africa | Sequencing | Whole gene | Eth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | GAG/AAG | 667 | 223 | Glu/Lys | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 50ug/ml | Microplate almar blue assay | 41/41 | 1/0 | mabA -15 C/T | - |
| Morlock GP AAC 2003 | del T | 703 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| Morlock GP AAC 2003 | CAG/TAG | 736 | 246 | Gln/STOP | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | mabA -15 C/T | - |
| Morlock GP AAC 2003 | del G | 768 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| DeBarber AE PNAS 2000 | ins 1 bp | 811 | - | Frameshift | Published 2000 | South Africa | Sequencing | Whole gene | HEth | N.S. | Proportion method. | 40132 | 1/0 | None found in region analyzed. | - |
| DeBarber AE PNAS 2000 | ACG/AAG | 1025 | 342 | Thr/Lys | Published 2000 | South Africa | Sequencing | Whole gene | HEth | N.S. | Proportion method. | 40132 | 3/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | ATC/AGC | 1013 | 338 | Ile/Ser | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr, mabA -15 C/T | - |
| DeBarber AE PNAS 2000 | GCC/CCC | 1141 | 381 | Ala/Pro | Published 2000 | South Africa | Sequencing | Whole gene | HEth | N.S. | Proportion method. | 40132 | 2/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | GGC/GAC | 1154 | 385 | Gly/Asp | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr, mabA -15 C/T | - |
| Morlock GP AAC 2003 | ACG/GCG | 1174 | 392 | Thr/Ala | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| Morlock GP AAC 2003 | GGT/GAT | 1238 | 413 | Gly/Asp | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 50ug/ml | Microplate almar blue assay | 41/41 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | del C | 1290 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 50ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Ser315Thr | - |
| Morlock GP AAC 2003 | del GC | 1322-1323 | - | Frameshift | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | >200ug/ml | Microplate almar blue assay | 41/41 | 1/0 | None found in region analyzed. | - |
| Morlock GP AAC 2003 | CGT/AGT | 1387 | 463 | Arg/Ser | Published 2003 | USA, Russia, Brazil | Sequencing | Whole gene | HEth | 50ug/ml | Microplate almar blue assay | 41/41 | 1/0 | katG Trp341Ser, mabA -15 C/T | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |