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Rv3795 More about Rv3795 on TBDB.org More about Rv3795 on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv3795: Codons 300 to 324: 24 mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Sreevatsan S AAC 1997 | ATG/CTG | 916 | 306 | Met/Leu | Published 1997 | USA, Mexico, Europe, Yemen, the Philippines, Japan, India | PCR-SSCP, Sequencing | Whole gene | E | 40ug/ml | BACTEC 460, agar diffusion method | 69/99 | 1/0 | - | ![]() |
| Lee HY YonseiMedJ 2002 | ATG/TTG | 916 | 306 | Met/Leu | Published 2002 | South Korea | Sequencing | Whole gene | E, | 2ug/ml | Proportion method | 21/26 | 1/0 | None in region amplified (see Gene coverage). | - |
| Sreevatsan S AAC 1997 | ATG/GTG | 916 | 306 | Met/Val | Published 1997 | USA, Mexico, Europe, Yemen, the Philippines, Japan, India | PCR-SSCP, Sequencing | Whole gene | E | 40ug/ml | BACTEC 460, agar diffusion method | 69/99 | 12/0 | - | ![]() |
| Sreevatsan S AAC 1997 | ATG/ATA | 918 | 306 | Met/Ile | Published 1997 | USA, Mexico, Europe, Yemen, the Philippines, Japan, India | PCR-SSCP, Sequencing | Whole gene | E | 20ug/ml | BACTEC 460, agar diffusion method | 69/99 | 11/0 | - | ![]() |
| Sreevatsan S AAC 1997 | ATG/ATT | 918 | 306 | Met/Ile | Published 1997 | USA, Mexico, Europe, Yemen, the Philippines, Japan, India | PCR-SSCP, Sequencing | Whole gene | E | 20ug/ml | BACTEC 460, agar diffusion method | 69/99 | 2/0 | - | ![]() |
| Sreevatsan S AAC 1997 | ATG/ATC | 918 | 306 | Met/Ile | Published 1997 | USA, Mexico, Europe, Yemen, the Philippines, Japan, India | PCR-SSCP, Sequencing | Whole gene | E | 20ug/ml | BACTEC 460, agar diffusion method | 69/99 | 3/0 | - | ![]() |
| Lee HY YonseiMedJ 2002 | ATG/ACG | 917-918 | 306 | Met/Thr | Published 2002 | South Korea | Sequencing | ERDR | E | 2ug/ml | Proportion method | 21/26 | 1/0 | None in region amplified (see Gene coverage). | - |
| Srivastava S JMM 2009 | GTG/GGC | 926-927 | 309 | Val/Gly | Published 2009 | India | Sequencing | Whole gene | EHR | 128ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, A310R, D311R, V369A, P375A, F398Y, P461S; embC T270I; embR G240R" | - |
| Srivastava S JMM 2009 | GCG/CGT | 928-930 | 310 | Ala/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 128ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, V309G, D311R, V369A, P375A, F398Y, P461S; embC T270I; embR G240R" | - |
| Srivastava S JMM 2009 | GAC/CGT | 931-932 | 311 | Asp/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 128ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, V309G, A310R, V369A, P375A, F398Y, P461S; embC T270I; embR G240R" | - |
| Srivastava S CurrMicro 2006 | GAC/CAC | 931 | 311 | Asp/His | Published 2006 | India | Sequencing | ERDR | E, EHR, HR, EH | 12ug/ml | Proportion method, E-Test | 23/23 | 1/0 | None in region amplified (see Gene coverage). R/Tot and R/S calculated from Table 1. | - |
| Srivastava S JMM 2009 | CAT/CGT | 935 | 312 | His/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 96ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB S317T, A356F, L359I, R367P; embC G288V, M310K, Y327N" | - |
| Lee HY YonseiMedJ 2002 | GGC/GCG | 941 | 314 | Gly/Ala | Published 2002 | South Korea | Sequencing | ERDR | E | 4ug/ml | Proportion method | 21/26 | 1/0 | Tyr322Cys on embB. | - |
| Tracevska T ResMicro 2004 | GGC/GAG | 941-942 | 314 | Gly/Glu | "Published 2004; isolates collected in 2001-2002" | Latvia | Sequencing | ERDR | EHRS | N.S. | BACTEC radiorespiratory method (7.5ug/ml EMB), and absolute concentration method on L-J medium (cutoff 2.0ug/ml EMB) | 33/66 | 1/0 | None in region amplified (see Gene coverage). | - |
| Srivastava S JMM 2009 | TAT/CTG | 943-945 | 315 | Tyr/Leu | Published 2009 | India | Sequencing | Whole gene | EHR | 256ug/ml | Proportion method, E-Test | 44/44 | 1/0 | embB L239P, N318S, V377G, E378A, Y384N, N400K, V452L | - |
| Srivastava S JMM 2009 | AGC/ACC | 950 | 317 | Ser/Thr | Published 2009 | India | Sequencing | Whole gene | EHR | 96ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB H312R, A356F, L359I, R367P; embC G288V, M310K, Y327N" | - |
| Srivastava S JMM 2009 | AAC/CAT | 352 | 318 | Asn/His | Published 2009 | India | Sequencing | Whole gene | EHR | 16ug/ml | Proportion method, E-Test | 44/44 | 1/0 | embC T270I | - |
| Srivastava S JMM 2009 | AAC/AGC | 953 | 318 | Asn/Ser | Published 2009 | India | Sequencing | Whole gene | EHR | 256ug/ml | Proportion method, E-Test | 44/44 | 1/0 | embB L239P, Y315L, V377G, E378A, Y384N, N400K, V452L | - |
| Srivastava S JMM 2009 | AAC/AAA | 954 | 318 | Asn/Lys | Published 2009 | India | Sequencing | Whole gene | EHR | 32ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, N368A, S380R, P397Q, G459A, R460C; embR T32P, D53H" | - |
| Sugawara I Jpn J Infect Dis 2005 | TAT/GAT | 955 | 319 | Tyr/Cys | - | - | - | - | - | - | - | - | - | - | - |
| Chan RCY JAC 2007 | TAT/AAT | 955 | 319 | Tyr/Asn | - | - | - | - | - | - | - | - | - | - | - |
| Sugawara I Jpn J Infect Dis 2005 | TAT/TGT | 956 | 319 | Tyr/Cys | - | - | - | - | - | - | - | - | - | - | - |
| Plinke C AAC 2006 | TAT/TCT | 956 | 319 | Tyr/Ser | 2001 | Germany | Sequencing | ERDR | EHR | N.S. | Proportion method, BACTEC 460 | 101/159 | 1/0 | None in region amplified (see Gene coverage). R/Tot and R/S calculated from Table 1. | - |
| Lee HY YonseiMedJ 2002 | TAT/TGT | 965 | 322 | Tyr/Cys | Published 2002 | South Korea | Sequencing | ERDR | E | 4ug/ml | Proportion method | 21/26 | 1/0 | Ala314Gly on embB. | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
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© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |