|
|
|
|
|
|
|
|
|
|
Rv1267c More about Rv1267c on TBDB.org More about Rv1267c on TubercuList |
Display all mutations or select a bar from the histogram above to examine in greater detail |
| Rv1267c: all mutations (high confidence mutations are highlighted in yellow) | |||||||||||||||
| Primary reference | Polymorphism | Nucleotide position | Codon position | Amino acid | Time period | Origin | Molecular detection method | Gene coverage | Resistance pattern | MIC | Susceptibility testing method | R/Total isolates | R/S isolates with mutation | Additional mutations | High confidence support |
| Ramaswamy SV AAC 2000 | ins A | -273 | -273 | intergenic | Published 2000 | USA, Russia | Sequencing | Whole gene | E | 20-40ug/ml | BACTEC 460, agar diffusion method | 75/108 | 1/0 | - | - |
| Srivastava S JMM 2009 | GTG/GGC | 20-21 | 7 | Val/Gly | Published 2009 | India | Sequencing | Whole gene | EHR | 48ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB V360M; embC A247P, I297L, W326R" | - |
| Srivastava S JMM 2009 | ACC/CCG | 94-96 | 32 | Thr/Pro | Published 2009 | India | Sequencing | Whole gene | EHR | 32ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, N318K, E368A, S380R, P397Q, G459A, R460C; embR D53H" | - |
| Srivastava S JMM 2009 | GAT/CAT | 157 | 53 | Asp/His | Published 2009 | India | Sequencing | Whole gene | EHR | 32ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, N318K, E368A, S380R, P397Q, G459A, R460C; embR T32P" | - |
| Srivastava S JMM 2009 | TGC/TAT | 329-330 | 110 | Cys/Tyr | Published 2009 | India | Sequencing | Whole gene | EHR | 8ug/ml | Proportion method, E-Test | 44/44 | 1/0 | embC G288W, V303G | - |
| Srivastava S JMM 2009 | CTG/CGT | 515-516 | 172 | Leu/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 4ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB E368A, S380R, P397Q, R460C; embC A244T, G288W, V303G" | - |
| Srivastava S JMM 2009 | GCG/GTG | 527 | 176 | Ala/Val | Published 2009 | India | Sequencing | Whole gene | EHR | 6ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB V360M, A431T; embC G272S, H285Y, M300R, A307T; embR I369T" | - |
| Srivastava S JMM 2009 | CGT/GGC | 556-558 | 186 | Arg/Gly | Published 2009 | India | Sequencing | Whole gene | EHR | 24ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306L, E368A, S380R, P397Q, R460C; embC I297T; embR S188R, E200A, L211M" | - |
| Srivastava S JMM 2009 | GCG/GTG | 559-560 | 187 | Ala/Val | Published 2009 | India | Sequencing | Whole gene | EHR | 4ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB G374V, W395C, N400P; embC G288W, V303G; embR R230W, I369T" | - |
| Srivastava S JMM 2009 | AGC/CGT | 541-543 | 188 | Ser/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB D299E, E378A, R469P, R471P; embR L211M, L320V" | - |
| Srivastava S JMM 2009 | GAA/GCG | 599-600 | 200 | Glu/Ala | Published 2009 | India | Sequencing | Whole gene | EHR | 24ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306L, E368A, S380R, P397Q, R460C; embC I297T; embR S186G, S188R, L211M" | - |
| Srivastava S JMM 2009 | CTG/ATG | 631 | 211 | Leu/Met | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB D299E, E378A, R469P, R471P; embR S188R, L320V" | - |
| Srivastava S JMM 2009 | GAT/GAA | 669 | 223 | Asp/Glu | Published 2009 | India | Sequencing | Whole gene | EHR | 16ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB G331R, V360M, G374V, G401S; embC I297T" | - |
| Srivastava S JMM 2009 | CGT/TGG | 688-690 | 230 | Arg/Trp | Published 2009 | India | Sequencing | Whole gene | EHR | 4ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB S347I, E368D, R460L; embC I297T; embR I396T" | - |
| Srivastava S JMM 2009 | GGC/CGT | 718-720 | 240 | Gly/Arg | Published 2009 | India | Sequencing | Whole gene | EHR | 128ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB M306V, V309G, A319R, D311R, V369A, P375A, F398Y, P461S; embC T270I" | - |
| Srivastava S JMM 2009 | CTG/ATG | 874 | 292 | Leu/Met | Published 2009 | India | Sequencing | Whole gene | EHR | 6ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB D299E, A356S, P371R, E378K; embR R230W, L303E" | - |
| Srivastava S JMM 2009 | CTG/GAA | 907-909 | 303 | Leu/Glu | Published 2009 | India | Sequencing | Whole gene | EHR | 6ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB D299E, A356S, P371R, E378K; embR R230W, L292M" | - |
| Srivastava S JMM 2009 | CTG/GTG | 958 | 320 | Leu/Val | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB D299E, E378A, R469P, R471P; embR S188R, L211M" | - |
| Srivastava S JMM 2009 | AGC/AAC | 977 | 326 | Ser/Asn | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB A357S, A379T; embC V287F, Y309N; embR L320V, V350G, H351Q, R356G, I369T" | - |
| Srivastava S JMM 2009 | GTG/GGC | 1049-1050 | 350 | Val/Gly | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB A357S, A379T; embC V287F, Y309N; embR L320V, S326N, H351Q, R356G, I369T" | - |
| Srivastava S JMM 2009 | CAT/CAG | 1053 | 351 | His/Glu | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB A357S, A379T; embC V287F, Y309N; embR L320V, S326N, V350G, R356G, I369T" | - |
| Srivastava S JMM 2009 | CGT/GGC | 1066-1068 | 356 | Arg/Gly | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB A357S, A379T; embC V287F, Y309N; embR L320V, S326N, V350G, H351Q, I369T" | - |
| Srivastava S JMM 2009 | ATT/ACC | 1106-1107 | 369 | Ile/Thr | Published 2009 | India | Sequencing | Whole gene | EHR | 2ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB A357S, A379T; embC V287F, Y309N; embR L320V, S326N, V350G, H351Q, R356G" | - |
| Ramaswamy SV AAC 2000 | CAG/CGG | 1136 | 379 | Gln/Arg | Published 2000 | USA, Russia | Sequencing | Whole gene | E | 20-40ug/ml | BACTEC 460, agar diffusion method | 75/108 | 1/0 | - | - |
| Srivastava S JMM 2009 | ATT/ACC | 1187-1188 | 396 | Ile/Thr | Published 2009 | India | Sequencing | Whole gene | EHR | 4ug/ml | Proportion method, E-Test | 44/44 | 1/0 | "embB S347I, E368D, R460L; embC I297T; embR R230W" | - |
Disclaimer: These are all putative mutations found in drug resistant clinical TB isolates. No a priori decisions have been made as to whether these mutations are causally related to resistance or possible secondary mutations. |
|
© 2010 Andreas Sandgren | Supported by the Swedish Research Council | Contact Database Curator |